Database on the web

Description: Sequences of 5S rRNAs from varius species.

Subject areas: Genetics, Bioinformatics

Content: RNA, Curated, Sequence

Database on the web

Description: A collection of published indices of different physicochemical and biological properties of amino acids.

Subject areas: Bioinformatics

Content: Biomolecule, Computationally generated, Links to other sources

Database on the web

Description: Describes the many-to-many relationships between Affymetrix probesets transcripts and genes, by directly mapping every probe against publicly available mRNAs/cDNA sequences from RefSeq and Ensembl.

Subject areas: Bioinformatics, Genomics

Content: DNA, Curated, Links to other sources, Gene

Database on the web

Description: A database providing test cases for protein-protein docking.

Subject areas: Bioinformatics, Structural biology

Content: Protein, Computationally generated, Interaction, Structure

Database on the web

Description: A compendium of alignments of protein families generated using the PRINTS database.

Subject areas: Bioinformatics

Content: Gene family, Sequence, Computationally generated

Database on the web

Description: A website for browsing, querying and visualizing data from the Gene Ontology Consortium (GO).

Subject areas: Bioinformatics, Molecular biology, Biochemistry, Cell biology

Content: Organism, Biomolecule, Curated, Ontology, Nomenclature

Database on the web

Description: Contains general information, phylogenetic analysis and purification methods for Archaeal histones.

Subject areas: Molecular biology, Bioinformatics, Evolutionary biology

Content: Gene family, Curated, Phylogeny, Links to other sources, Synopses, Interaction

Database on the web

Description: Contains genomic mapping data for farm animals. Contains data on cat, chicken, cow, deer, horse, pig, salmon, sheep, tilapia, & turkey.

Subject areas: Bioinformatics, Genomics, Genetics

Content: DNA, Gene, Ontology, Journal article, Curated

Database on the web

Description: Contains alternative splicing analysis and their splicing variants for 9 vertebrate species, 4 insects, and nematodes

Subject areas: Bioinformatics, Genetics, Genomics

Content: Gene, DNA, Sequence, Organism, Curated

Database on the web

Description: A compendium that provides databases and tools useful for analyzing protein structures and their sequences.

Subject areas: Bioinformatics, Structural biology

Content: Protein, Synopses, Links to other sources

Database on the web

Description: Provides information on proteins identified in analysis of nucleoli isolated from Arabidopsis cell culture, organized on the basis of the Arabidopsis gene identifier number. Includes protein description and class, whether or not the plant protein has a homologue in the most recent human nucleolar proteome and the results of reciprocal BLAST analysis.

Subject areas: Proteomics, Plant biology, Bioinformatics, Genomics

Content: Protein, Organism, DNA, Curated, Sequence, Images, Expression, Links to other sources

Database on the web

Description: A database of sequence alignments categorized by core blocks of conservation sequence length, similarity, and the presence of insertions and N/C-terminal extensions.

Subject areas: Bioinformatics, Structural biology

Content: Protein, Sequence, Curated

Database on the web

Description: A USDA-funded public repository for plant microarray data.

Subject areas: Plant biology, Genetics, Bioinformatics

Content: cDNA, Gene, Expression, Curated, Experimental Data, Images

Database on the web

Description: Contains information on mutations in genes associated with breast cancer.

Subject areas: Bioinformatics, Cancer, Genomics

Content: Gene, Disease, Curated, Sequence

Database on the web

Subject areas: Bioinformatics, Genetics, Genomics, Molecular biology

Database on the web

Description: Contains scripts to aid developers working with the BioMoby XML shema.

Subject areas: Bioinformatics

Content: Biomolecule, Links to other sources, Synopses

Database on the web

Description: A framework for exploring the relationships among the molecular and genomic, proteomic, systems, and organismal worlds.

Subject areas: Genomics, Bioinformatics, Cell biology, Molecular biology

Content: Biomolecule, Protein, Organism, Curated, Structure, Computationally generated, Sequence

Database on the web

Description: A hierarchical domain classification of protein structures in the Protein Data Bank (PDB).

Subject areas: Biochemistry, Bioinformatics

Content: Gene family, Structure, Computationally generated, Curated

Database on the web

Description: The protein classification component of NCBI's Entrez query and retrieval system.

Subject areas: Proteomics, Bioinformatics

Content: Protein, Computationally generated, Links to other sources

Database on the web

Description: A database containing CEPH-Généthon mapping and YAC clone data.

Subject areas: Bioinformatics, Genomics

Content: DNA, Curated, Sequence, Experimental Data