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 09 Feb 2010 
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Databases on the web - Developmental biology
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Database on the web
Aniseed (Ascidian Network for In Situ Expression and Embryological Data)
Description: A model organism database for Ciona and Halocynthia that includes embryological, anatomical, genomic and gene expression data.
Subject areas: Developmental biology, Genetics
Content: Gene, Expression, Sequence, Curated, Links to other sources

Database on the web
Axeldb
Description: Contains gene expression data on Xenopus.
Subject areas: Genetics, Developmental biology
Content: Gene, EST/STS, Experimental Data, Synopses

Database on the web
CASCAD
Description: Information on rat and zebrafish candidate SNPs, including the raw data underlying their discovery.
Subject areas: Genetics, Genomics, Developmental biology
Content: SNP, Sequence, Organism, Curated, Links to other sources

Database on the web
CnidBase (Cnidarian Evolutionary Genomics Database)
Description: Contains information for investigating the evolutionary, developmental and ecological factors that affect gene expression and gene function in cnidarians.
Subject areas: Developmental biology, Evolutionary biology
Content: Gene, Organism, Sequence, Links to other sources, Interaction

Database on the web
Comparative Mammalian Brain Collection
Description: Contains images and information from a collection of sectioned and stained brains of mammals. Viewers can see and download photographs of brains of over 100 different species of mammals (including humans) representing 17 mammalian orders.
Subject areas: Neuroscience, Developmental biology
Content: Images, Curated

Database on the web
Cre Transgenic Database
Description: A database of lines of Cre-transgenic mice displaying tissue specific expression.
Subject areas: Developmental biology
Content: Cell, Journal article, Experimental Data, Curated

Database on the web
DBTGR (DataBase of Tunicate Gene Regulation)
Description: Contains information on regulation of tunicate genes collected from literature.
Subject areas: Genetics, Developmental biology
Content: Organism, Gene, Curated, Sequence

Database on the web
Drosophila DNase I Footprint Database
Description: A systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster.
Subject areas: Bioinformatics, Developmental biology, Genetics
Content: Protein, Organism, Gene, Curated, Interaction

Database on the web
DroSpeGe (Drosophila Species Genomes)
Description: Contains the genomes of 12 Drosophila species.
Subject areas: Genomics, Bioinformatics, Developmental biology
Content: Organism, Gene, Sequence, Curated

Database on the web
EADHB (Electronic Atlas of the Developing Human Brain)
Description: Database of expression in the developing human brain with 2D and 3D image data along with standard text data.
Subject areas: Neuroscience, Neurology, Developmental biology
Content: Images, Expression, Curated

Database on the web
EMAGE
Description: A curated database of gene expression patterns generated by in situ techniques in the developing mouse embryo.
Subject areas: Developmental biology, Genetics, Proteomics
Content: Gene, Expression, Curated, Images

Database on the web
EMAP (Edinburgh Mouse Atlas Project)
Description: A digital atlas of mouse development and database for spatially mapped data such as in situ gene expression and cell lineage.
Subject areas: Developmental biology, Genetics
Content: Organism, Gene, Experimental Data, Curated

Database on the web
EMAP (The Standard Anatomical Nomenclature Database)
Description: A standardised nomenclature for the developmental anatomy of the mouse.
Subject areas: Bioinformatics, Developmental biology, Genetics, Genomics
Content: Organism, Ontology, Curated, Nomenclature

Database on the web
Embryological Modelling
Description: A collection of data on sections of embryo development.
Subject areas: Developmental biology, Medical education
Content: Organism, Curated, Experimental Data, Links to other sources

Database on the web
Fly View (A Drosophila Image Database)
Description: An image database of Drosophila development and genetics, expression patterns of enhancer trap lines with information on stocks.
Subject areas: Developmental biology, Genetics, Cell biology
Content: RNA, DNA/Organism stock, Curated, Sequence

Database on the web
FlyView
Description: An image database on Drosophila development and genetics, especially on expression patterns of genes.
Subject areas: Developmental biology, Biochemistry
Content: Gene, Experimental Data, Links to other sources, Images

Database on the web
GenePaint
Description: A virtual microscope for showing mRNA expression patterns during mouse development. Searchable by anatomy, develpmental stage, and by gene. BLAST searches are also possible.
Subject areas: Developmental biology
Content: Gene, RNA, Curated, Experimental Data

Database on the web
GeNet (Genes Networks Database)
Description: Contains information on the functional organization of regulatory gene networks that act at embryogenesis.
Subject areas: Genetics, Developmental biology
Content: Gene, Organism, Computationally generated, Curated, Links to other sources, Interaction

Database on the web
HAGR (Human Ageing Genomic Resources)
Description: A collection of databases and tools designed to help researchers understand the genetics of human ageing.
Subject areas: Developmental biology, Genetics
Content: Gene, Disease, Organism, Curated, Links to other sources, Experimental Data

Database on the web
Hedgehog Signaling Pathway Database
Description: A repository of information on Hedgehog developmental pathway. Provides centralized access to relevant information, provided for all genes and gene targets known to be involved in the Hegdehog pathway across various organisms.
Subject areas: Genetics, Developmental biology
Content: Gene family, Curated, Links to other sources

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