Database on the web

Description: Human and mouse 2D gels, with interactive images.

Subject areas: Genomics, Molecular biology, Cancer, Proteomics

Content: Protein, Experimental Data, Curated

Database on the web

Description: A 2D map of proteins for the yeast Saccharomyces cerevisiae.

Subject areas: Biochemistry, Molecular biology, Microbiology, Proteomics

Content: Protein, Experimental Data, Curated

Database on the web

Description: A meta-database of 2D-PAGE protein gel images found on the web.

Subject areas: Biochemistry, Molecular biology, Proteomics

Content: Protein, Links to other sources, Curated

Database on the web

Description: A database containing structural annotations for proteomes of Prokaryotic Eukaryotic and Archaic organisms.

Subject areas: Proteomics, Molecular biology

Content: Organism, Protein, Sequence, Curated

Database on the web

Description: A collection of domain-domain interactions in proteins for which high-resolution three-dimensional structures are known.

Subject areas: Proteomics, Structural biology, Biochemistry

Content: Protein, Biomolecule, Structure, Curated

Database on the web

Description: Categorizes all amino acid nucleotide interactions from experimentally determined structures.

Subject areas: Molecular biology, Proteomics

Content: DNA, Protein, RNA, Interaction, Curated, Structure

Database on the web

Description: A database of protein domain families with complete coverage of all protein sequences.

Subject areas: Genetics, Proteomics

Content: Protein, Protein family, Curated, Computationally generated, Sequence

Database on the web

Description: A peptide query, description and design, with statistical data for all or a select group of peptides.

Subject areas: Proteomics

Content: Protein, Sequence, Sequence, Curated

Database on the web

Description: A collection of active protein sequences, or protein fragments or subsequences. Includes three databases BAC ( BioACtive peptides), DORRS(Database Of RGD Related Sequence) and TRANSIT(TRANsglutamination SITes).

Subject areas: Proteomics, Biochemistry

Content: Protein, Sequence, Curated

Database on the web

Description: Provides information on proteins identified in analysis of nucleoli isolated from Arabidopsis cell culture, organized on the basis of the Arabidopsis gene identifier number. Includes protein description and class, whether or not the plant protein has a homologue in the most recent human nucleolar proteome and the results of reciprocal BLAST analysis.

Subject areas: Proteomics, Plant biology, Bioinformatics, Genomics

Content: Protein, Organism, DNA, Curated, Sequence, Images, Expression, Links to other sources

Database on the web

Description: The protein classification component of NCBI's Entrez query and retrieval system.

Subject areas: Proteomics, Bioinformatics

Content: Protein, Computationally generated, Links to other sources

Database on the web

Description: A database of proteins, automatically clustered according to their Swiss-Prot annotation and sequence similarity using geneRAGE.

Subject areas: Proteomics, Bioinformatics

Content: Protein, Computationally generated, Curated, Links to other sources

Database on the web

Description: A database containing predicted peptides from all publicly available fully sequenced genomes.

Subject areas: Bioinformatics, Genomics, Proteomics

Content: DNA, Gene, Ontology, Sequence, Links to other sources

Database on the web

Description: Automatically analyses carbohydrate 3D structures contained in the PDB and make the results publicly available on the internet.

Subject areas: Structural biology, Proteomics

Content: Biomolecule, Protein, Curated, Computationally generated, Links to other sources, Structure

Database on the web

Description: A collection of documented proteolytic events for natural proteins in vivo or in vitro. Entries are defined by a combination of three attributes: protease, protein substrate and cleavage site. The database integrates 3070 proteolytic events for 470 different proteases captured from public archives and publications

Subject areas: Proteomics

Content: Protein, Enzyme, Interaction, Sequence

Database on the web

Description: A protein-gene linkage map of the unicellular cyanobacterium Synechosystis sp. strain PCC6803.

Subject areas: Genetics, Genomics, Proteomics

Content: DNA, Curated, Experimental Data

Database on the web

Description: A database of Globular domains derived from a non-redundant set of protein chains.

Subject areas: Proteomics, Structural biology

Content: Protein, Computationally generated, Sequence, Curated

Database on the web

Description: A database designed to store DEPs data from comparative proteomics experiments and provide a platform for data query and analysis.

Subject areas: Biochemistry, Cancer, Molecular biology, Proteomics

Content: Protein, Disease, Curated, Experimental Data

Database on the web

Description: A database of proteins that lack 3D structure in their native state.

Subject areas: Proteomics

Content: Protein, Curated, Links to other sources

Database on the web

Description: A database containing Type III secretion system (TTSS) proteins from most gram-negative bacteria, flagellar export proteins.

Subject areas: Biochemistry, Molecular biology, Proteomics, Genomics

Content: Protein family, Protein, Sequence, Curated, Links to other sources